Pathology Portal

A guide to multiomics pathway analysis

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In this webinar we will discuss how to perform comparative multiomics pathway analyses using the ReactomeGSA pathway analysis system. We will be comparing independent studies that use different 'omics approaches, as well as different 'omics measurements from the same study. Additionally, we will be looking at simple to use methods to integrate public datasets into one's own analysis. Finally, we will use the ReactomeGSA R package to improve the annotations of single-cell RNAseq data. During the webinar we will use Reactome's web interface as well as the ReactomeGSA Bioconductor R package.

Who is this course for?

This webinar is aimed at students or early researchers beginning to use bioinformatics resources in their studies/research who wish to learn more about multiomics pathway analysis and Reactome.

Outcomes

By the end of the webinar you will be able to:

  • Discuss how to perform comparative multi-omics pathway analyses using ReactomeGSA pathway analysis
  • Describe methods to integrate public datasets into one's own analysis
  • Apply ReactomeGSA to perform multiomics comparative pathway analyses

Speakers

  • Johannes Griss
    EMBL-EBI/Medical University of Vienna

Resource details

Contributed by: Pathology Portal
Authored by: Johannes Griss EMBL-EBI/, Medical University of Vienna/ The European Molecular Biology Laboratory-European Bioinformatics Inst
Licence: Creative Commons: Attribution-NonCommercial-NoDerivatives 4.0 International More information on licences
First contributed: 08 December 2022
Audience access level: Full user

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