Pathology Portal

A guide to RNA families

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Rfamis a database of RNA families that currently contains almost 4,000 families. Together with the Infernal software, Rfam is commonly used to annotate non-coding RNAs in newly sequenced genomes. In this webinar, we will give an overview of the data available in Rfam and give a live demo of annotating a genome with non-coding RNAs using Rfam and the Infernal software.

We will be joined by a guest speaker, Prof Sam Griffiths-Jones (University of Manchester), who founded Rfam in 2002 and is now responsible for miRBase, the microRNA registry. We will discuss the ongoing efforts to synchronise the microRNA families between Rfam and miRBase.

Who is this course for?

This webinar is suitable forany student or researcher in life scienceswho isinterested in learning about RNA families and the EMBL-EBI resourceRfam. No prior knowledge of bioinformatics is required, but an undergraduate level knowledge of biology would be useful.

Outcomes

By the end of the webinar you will be able to:

  • Navigate the Rfam website and access RNA family information
  • Annotate genomes with non-coding RNA families using Rfam and Infernal

Speakers

  • Anton Petrov
    EMBL-EBI
  • Sam Griffiths-Jones
    University of Manchester
  • Nancy Ontiveros-Palacios
    EMBL-EBI
  • Eric Nawrocki
    National Center for Biotechnology Information

Resource details

Contributed by: Pathology Portal
Authored by: Anton Petrov, The European Molecular Biology Laboratory-European Bioinformatics Institute's (EMBL-EBI)
Nancy Ontiveros-Palacios, The European Molecular Biology Laboratory-European Bioinformatics Institute's (EMBL-EBI)
Eric Nawrocki, National Center for Biotechnology Information
Licence: Creative Commons: Attribution-NonCommercial-NoDerivatives 4.0 International More information on licences
First contributed: 07 December 2022
Audience access level: Full user

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