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Home Pathology Portal Genetics and Genomics Advanced bioinformatics - from genomes to systems
Advanced bioinformatics - from genomes to systems
Pathology Portal

How to use programming and scripting via command line and the Galaxy interface

Getting started with the Open Targets Platform GraphQL API

Type: Video - 49 min 8 sec
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Authored by Andrew Hercules, The European Molecular Biology Laboratory-European Bioinformatics Institute's (EMBL-EBI). - M Prahladan, Pathology Portal - Helena Cornu, The European Molecular Biology Laboratory-European Bioinformatics Institute's (EMBL-EBI).

Getting gene and genome data programmatically: Ensembl REST API

Type: Video - 34 min 47 sec
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Authored by Emily Perry, The European Molecular Biology Laboratory-European Bioinformatics Institute's (EMBL-EBI). - M Prahladan, Pathology Portal

Croupier, an user-centric meta-orchestrator for cross-platform workflow delivery and execution

Type: Web link
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Authored by Jesús Gorroñogoitia, Atos - Mahesh Prahladan, Pathology Portal

Introducing PerMedCoE Building Blocks and Workflows to streamline biological analysis pipelines

Type: Video - 32 min 37 sec
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Authored by Jesse Harrison, CSC - IT Center for Science, The European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI)